Endosymbiont of Bathymodiolus septemdierum str. Myojin knoll

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Endosymbiont of Bathymodiolus septemdierum str. Myojin knoll


Gene Summary

Adenine Count

452411 bp

Thymine Count

447718 bp

Guanine Count

289199 bp

Cytosine Count

280106 bp

Genome Length

1469434 bp

Protein-coding Genes

1553 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+575429 - 575458Not Available
tyrosine-type recombinase/integraseBSEPE_RS03045Not Available-575601 - 57657537383.3
hypothetical proteinBSEPE_RS03050Not Available-576572 - 57702717444.1
hypothetical proteinBSEPE_RS03055Not Available-577020 - 57735212820.6
helix-turn-helix domain-containing proteinBSEPE_RS03060Not Available-577349 - 57763610619.8
hypothetical proteinBSEPE_RS03065Not Available+577816 - 5780468417.15
hypothetical proteinBSEPE_RS03070Not Available+578039 - 5782758815.55
duf3310 domain-containing proteinBSEPE_RS03075Not Available+578268 - 57862713642.5
chc2 zinc finger domain-containing proteinBSEPE_RS03080Not Available+578608 - 581277100956.0
dna adenine methylaseBSEPE_RS03085Not Available+581450 - 58175211385.5

Displaying genes 1 – 10 of 1555 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

244 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 244 metabolites