Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein | B5C34_05240 | Not Available | - | 1086497 - 1087435 | 34256.4 |
| Gp35 | B5C34_05245 | Not Available | - | 1087490 - 1087819 | 10738.9 |
| Hypothetical protein | B5C34_05250 | Not Available | - | 1087860 - 1088948 | 37803.9 |
| serine protease | B5C34_05255 | Not Available | - | 1089077 - 1090000 | 34405.0 |
| hypothetical protein | B5C34_05260 | Not Available | - | 1090275 - 1090697 | 14960.1 |
| hypothetical protein | B5C34_05265 | Not Available | - | 1090690 - 1091052 | 13360.0 |
| C repressor | B5C34_05270 | Not Available | - | 1091153 - 1091947 | 28967.9 |
| Dna-binding protein ner | B5C34_05275 | Not Available | + | 1091871 - 1092191 | 11927.1 |
| Integrase | B5C34_05280 | Not Available | + | 1092188 - 1093780 | 59186.4 |
| Transposase b | B5C34_05285 | Not Available | + | 1093777 - 1094544 | 28430.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.