Alistipes onderdonkii strain An90

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes onderdonkii strain An90 is a Gram-negative, anaerobic bacterium characterized by its ability to thrive in environments devoid of oxygen. This microbe is part of the Alistipes genus, which is known to inhabit the gastrointestinal tract of various hosts, suggesting a role in intestinal microbiota. The anaerobic nature of A. onderdonkii strain An90 indicates its adaptation to low-oxygen environments, where it may engage in fermentation or other anaerobic metabolic processes for energy production. The Gram-negative classification of this strain implies a complex cell wall structure, consisting of a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature may influence its interaction with the host environment and its resilience to certain antimicrobial agents. Given its anaerobic requirement, A. onderdonkii strain An90 may contribute to the maintenance of gut homeostasis, potentially influencing the microbial diversity and metabolic activities within the intestinal ecosystem. The ability to survive and proliferate in anaerobic conditions aligns with the functional roles often attributed to members of the Alistipes genus, including the fermentation of dietary fibers and the production of short-chain fatty acids, which can have beneficial effects on host health. In summary, Alistipes onderdonkii strain An90 exemplifies a microbial entity well-adapted to anaerobic environments, highlighting the intricate relationships between gut bacteria and host physiology, particularly in terms of nutrient metabolism and microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes onderdonkii
Strainstrain An90

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes onderdonkii strain An90


Gene Summary

Adenine Count

715961 bp

Thymine Count

728375 bp

Guanine Count

1019402 bp

Cytosine Count

1019602 bp

Genome Length

3483340 bp

Protein-coding Genes

2760 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
abc transporter atp-binding proteinB5G41_00365Not Available-60969 - 6161623655.5
duf4836 domain-containing proteinB5G41_00370Not Available-61687 - 6325555520.7
dna recombination protein rmucB5G41_00375Not Available+63436 - 6489654275.1
hypothetical proteinB5G41_00380Not Available-65188 - 6574821252.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabB5G41_00385Not Available-65858 - 6656525119.2
had family hydrolaseB5G41_00390Not Available-66585 - 6736727837.3
ssra-binding proteinB5G41_00395Not Available-67364 - 6782817869.7
dna primaseB5G41_00400Not Available-68051 - 7002474042.7
hypothetical proteinB5G41_00405Not Available-70094 - 7078626270.9
excinuclease abc subunit bB5G41_00410Not Available+70960 - 7300277121.9

Displaying genes 71 – 80 of 2810 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

187 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da

Displaying 1–10 of 187 metabolites