Nonlabens dokdonensis DSW-6

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens dokdonensis DSW-6 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and inability to form spores. This microorganism thrives optimally at a temperature of 25.0 °C, indicating a preference for moderate environmental conditions. The Gram-negative nature of Nonlabens dokdonensis DSW-6 suggests a particular structure of its cell wall, typically associated with an outer membrane containing lipopolysaccharides, which may play a role in its interactions within various ecosystems. Given its aerobic requirement, Nonlabens dokdonensis DSW-6 is likely to inhabit environments rich in oxygen, potentially influencing its distribution and ecological roles. The organism’s inability to form spores may limit its ability to withstand extreme environmental stresses; however, this trait may also reflect a specialization for stable habitats where aerobic conditions prevail. Further research into Nonlabens dokdonensis DSW-6 could elucidate its functional roles within microbial communities, particularly in environments where aerobic degradation processes are essential for nutrient cycling. Its specific adaptations to moderate temperatures and aerobic conditions may provide insights into microbial diversity and functional redundancy in similar ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens dokdonensis
StrainDSW-6

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens dokdonensis DSW-6


Gene Summary

Adenine Count

1271809 bp

Thymine Count

1260359 bp

Guanine Count

691910 bp

Cytosine Count

690554 bp

Genome Length

3914632 bp

Protein-coding Genes

3440 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sensor histidine kinaseDDD_RS00110Not Available-20939 - 2198840250.4
fist signal transduction proteinDDD_RS00115Not Available-21989 - 2311941726.9
pas domain-containing sensor histidine kinaseDDD_RS00120Not Available-23124 - 2510075274.0
heme no-binding domain-containing proteinDDD_RS00125Not Available-25093 - 2563520321.2
response regulatorDDD_RS00130Not Available-25635 - 2605115941.9
paqr family membrane homeostasis protein trhaDDD_RS00135Not Available-26179 - 2680823563.3
nad(p)h-dependent flavin oxidoreductaseDDD_RS00140Not Available-26801 - 2775734158.5
s8 family serine peptidaseDDD_RS00145Not Available-27961 - 2954156977.4
trna 2-thiouridine(34) synthase mnmaDDD_RS00150Not Available-29838 - 3103444637.2
fasciclin domain-containing proteinDDD_RS00155Not Available+31207 - 3217534796.2

Displaying genes 21 – 30 of 3491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites