Escherichia coli O104:H4 str. 2011C-3493

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O104:H4 str. 2011C-3493 is a Gram-negative, rod-shaped bacterium that typically occurs in pairs or as single cells. This strain thrives at an optimal temperature of 37.0°C, which corresponds to the human body temperature, suggesting its adaptation to host-associated environments. As a facultative anaerobe, E. coli O104:H4 str. 2011C-3493 can grow in both aerobic and anaerobic conditions, allowing it to exploit a variety of ecological niches within the host, such as the intestinal tract. The association of this strain with host environments highlights its potential interactions with the host's microbiome and immune system. Given its capabilities, E. coli O104:H4 str. 2011C-3493 may play a role in nutrient absorption and microbial competition within the gastrointestinal tract, contributing to the complex dynamics of gut microbiota. Understanding its growth characteristics and habitat preferences can provide insights into the ecological roles of E. coli in health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO104:H4 2011C-3493

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O104:H4 str. 2011C-3493
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O104:H4 str. 2011C-3493


Gene Summary

Adenine Count

1298006 bp

Thymine Count

1300875 bp

Guanine Count

1338990 bp

Cytosine Count

1335226 bp

Genome Length

5273097 bp

Protein-coding Genes

4655 genes

Non-Coding Genes

556 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+905579 - 905592Not Available
TransposaseO3K_RS04450Not Available-914853 - 9150416999.44
is110-like element isec45 family transposaseO3K_RS27420Not Available+915102 - 91623442519.1
Is150 transposase bO3K_RS26915Not Available+916247 - 91678321196.3
TransposaseO3K_RS04470Not Available-916969 - 91754721706.2
TransposaseO3K_RS04475Not Available-917432 - 91855643990.0
TransposaseO3K_RS04480Not Available+918644 - 91928622234.2
TransposaseO3K_RS04485Not Available+919325 - 9195679368.44
Pic serine protease precursorO3K_RS04490Not Available-919718 - 923836146461.0
Is629 transposaseO3K_RS04495Not Available-924001 - 92448017849.2

Displaying genes 1 – 10 of 5397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites