Edwardsiella tarda FL6-60

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Edwardsiella

Description

Edwardsiella tarda FL6-60 is a Gram-negative bacterium that belongs to the genus Edwardsiella, which is known for its association with aquatic environments. This particular strain, identified as FL6-60, exhibits the characteristic features of Gram-negative bacteria, including a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. The organism's morphological and physiological traits are consistent with other members of the genus, which are typically rod-shaped and motile due to the presence of flagella. While specific metabolic pathways and growth conditions for FL6-60 are not detailed, Edwardsiella species are generally facultatively anaerobic, allowing them to thrive in both aerobic and anaerobic environments. Ecologically, E. tarda strains are often found in freshwater and marine environments, where they may play a role in the decomposition of organic matter. This suggests that Edwardsiella tarda FL6-60 could be an important player in nutrient cycling within its habitat, contributing to the overall health of aquatic ecosystems. Understanding the ecological roles of such microorganisms can provide insights into their potential interactions within food webs and their significance in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusEdwardsiella
SpeciesEdwardsiella tarda
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Edwardsiella tarda FL6-60

Accession NumberNC_017309.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3202 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+106 - 117Not Available
Hypothetical proteinETAF_RS16245Not Available+1879 - 220211194.4
Conserved hypothetical bacteriophage proteinETAF_RS16250Not Available+2195 - 247610210.3
Putative tail componentETAF_RS16255Not Available+2488 - 306621553.6
Minor tail proteinETAF_RS16260Not Available+3063 - 347615453.2
Major tail proteinETAF_RS16265Not Available+3478 - 424826849.0
Tail assembly chaperoneETAF_RS16270Not Available+4256 - 469916261.8
Bacteriophage tail assembly chapterone - part of g+g' frameshift hybrid proteinETAF_RS16275Not Available+4708 - 503412194.5
Bacteriophage tail tape measure proteinETAF_RS16280Not Available+5024 - 7840100615.0
Bacteriophage tail tip assembly proteinETAF_RS17170Not Available+7840 - 816912627.1

Displaying genes 1 – 10 of 3387 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

303 records
Metabolite IDMetabolite nameStructureCAS number
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm00026123-oxohexadecanoyl-CoAC37H64N7O18P3SChemical structure of 3-oxohexadecanoyl-CoANot available
Average1019.926Da
Monoisotopic1019.324139Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm0002994glutathionylspermidineC17H36N6O5SNot available33932-35-3
Average436.57Da
Monoisotopic436.245692297Da

Displaying 11–20 of 303 metabolites