Tetragenococcus halophilus NBRC 12172

Cocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Tetragenococcus

Description

Tetragenococcus halophilus NBRC 12172 is a halophilic cocci-shaped bacterium that thrives in high-salinity environments. This microbe is part of the genus Tetragenococcus, which is characterized by its ability to tolerate and adapt to extreme saline conditions. Tetragenococcus halophilus has been isolated from environments such as salt-fermented foods, highlighting its role in fermentation processes within saline ecosystems. The cocci morphology of T. halophilus suggests a spherical shape, which is typical of many members of the family Micrococcaceae. This structural trait may contribute to its survival in high osmotic pressure environments, where maintaining cellular integrity is crucial. The presence of Tetragenococcus halophilus in fermented products indicates its potential utility in food biotechnology, particularly in the development of flavors and preservation techniques associated with salt-rich substrates. Moreover, the adaptation mechanisms of T. halophilus to extreme salinity not only enable its survival but may also influence microbial community dynamics in salt-rich habitats. Understanding the physiological and metabolic pathways of this organism could provide insights into microbial resilience and adaptation strategies in environments characterized by high salt concentrations. This knowledge is essential for both ecological studies and industrial applications, particularly in the context of sustainable food production and preservation methods.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusTetragenococcus
SpeciesTetragenococcus halophilus
StrainNBRC 12172

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tetragenococcus halophilus NBRC 12172


Gene Summary

Adenine Count

820683 bp

Thymine Count

818405 bp

Guanine Count

465935 bp

Cytosine Count

457697 bp

Genome Length

2562720 bp

Protein-coding Genes

2457 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Repressor protein cTEH_RS12955Not Available+1858172 - 185887026577.7
duf898 family proteinTEH_RS08995Not Available+1859012 - 185931711630.7
Hypothetical proteinTEH_RS12845Not Available+1859352 - 186001724466.3
IntegraseTEH_RS09005Not Available+1860121 - 186125744507.3
AttrNot AvailableNot Available+1861258 - 1861273Not Available
ThioredoxinTEH_RS09010Not Available-1861354 - 186168612553.0
chromosomal replication initiator protein dnaaTEH_RS00010Q839Z5+1 - 133550755.4
dna polymerase iii subunit betaTEH_RS00015O06672+1494 - 262442187.1
s4 domain-containing protein yaaaTEH_RS00020Not Available+2810 - 30499028.02
dna replication/repair protein recfTEH_RS00025Q839Z2+3036 - 415743557.2

Displaying genes 61 – 70 of 2577 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

135 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 135 metabolites