Collimonas fungivorans Ter331

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

(NCBI BioProject: PRJNA70793)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas fungivorans
StrainTer331

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas fungivorans Ter331

Accession NumberNC_015856.1

Gene Summary

Adenine Count

1050871 bp

Thymine Count

1046907 bp

Guanine Count

1543474 bp

Cytosine Count

1545637 bp

Genome Length

5186898 bp

Protein-coding Genes

4596 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
coa-acylating methylmalonate-semialdehyde dehydrogenaseCFU_RS00470Not Available-126332 - 12783153381.2
aspartate aminotransferase family proteinCFU_RS00475Not Available-127844 - 12917247637.3
plp-dependent aminotransferase family proteinCFU_RS00480Not Available+129338 - 13076852644.7
nad(p)-dependent oxidoreductaseCFU_RS00485Not Available-130796 - 1310147983.56
sdr family oxidoreductaseCFU_RS00490Not Available-131070 - 1312827287.49
nad(p)-dependent oxidoreductaseCFU_RS25055Not Available+131315 - 1314224094.11
duf4148 domain-containing proteinCFU_RS00495Not Available-131548 - 13195514058.4
tetr/acrr family transcriptional regulatorCFU_RS00500Not Available+132537 - 13315122066.9
lysr family transcriptional regulatorCFU_RS00505Not Available-133261 - 13419033654.5
sdr family nad(p)-dependent oxidoreductaseCFU_RS00510Not Available+134289 - 13525435366.8

Displaying genes 211 – 220 of 4744 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

15 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001785(2R,3R)-tartrateC4H6O6Chemical structure of (2R,3R)-tartrate87-69-4
Average150.0868Da
Monoisotopic150.0164379Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da

Displaying 1–10 of 15 metabolites