Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas fungivorans |
| Strain | Ter331 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Collimonas fungivorans Ter331
Accession NumberNC_015856.1
Gene Summary
Adenine Count
1050871 bp
Thymine Count
1046907 bp
Guanine Count
1543474 bp
Cytosine Count
1545637 bp
Genome Length
5186898 bp
Protein-coding Genes
4596 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | CFU_RS00365 | Not Available | - | 106724 - 107215 | 18000.8 |
| hcp family type vi secretion system effector | CFU_RS00370 | Not Available | - | 107278 - 107769 | 17733.0 |
| type vi secretion system contractile sheath large subunit | CFU_RS00375 | Not Available | - | 107793 - 109280 | 54714.4 |
| type vi secretion system contractile sheath small subunit | CFU_RS00380 | Not Available | - | 109282 - 109791 | 19014.8 |
| tetratricopeptide repeat protein | CFU_RS00385 | Not Available | - | 109857 - 110453 | 20498.4 |
| type vi secretion system lipoprotein tssj | CFU_RS00390 | Not Available | + | 110715 - 111314 | 20559.9 |
| type vi secretion system baseplate subunit tssk | CFU_RS00395 | Not Available | + | 111382 - 112728 | 50049.6 |
| type ivb secretion system protein icmh/dotu | CFU_RS00400 | Not Available | + | 112725 - 113501 | 28559.3 |
| type vi secretion system vgr family protein | CFU_RS00405 | Not Available | + | 113565 - 116204 | 96551.8 |
| hypothetical protein | CFU_RS00410 | Not Available | + | 116194 - 117408 | 45537.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.