Salmonella bongori NCTC 12419

Gram-negativeBacilliMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. There are now two Salmonella species, Salmonella bongori and Salmonella enterica. Certain serovars of Salmonella enterica are responsible for more serious diseases such as Typhoid fever.The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.Salmonella bongori. Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. (NCBI BioProject: PRJNA35217)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella bongori
StrainNCTC 12419

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella bongori NCTC 12419

Accession NumberNC_015761.1

Gene Summary

Adenine Count

1085539 bp

Thymine Count

1085208 bp

Guanine Count

1143870 bp

Cytosine Count

1145488 bp

Genome Length

4460105 bp

Protein-coding Genes

4017 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+846976 - 846991Not Available
Tyrosine-type recombinase/integraseSBG_RS23450Not Available-847066 - 84766022354.6
Baseplate assembly protein vSBG_RS03925P31340+847627 - 84818019913.4
Baseplate wedge subunitSBG_RS03930Not Available+848177 - 84853612934.4
Baseplate assembly protein jSBG_RS03935Not Available+848523 - 84943132768.9
Tail protein iSBG_RS03940Not Available+849424 - 85002922492.8
Tail proteinSBG_RS03945P26700+850026 - 85080227230.6
O-acyltransferase bSBG_RS03950Not Available+851338 - 85249544790.4
Tail fiberSBG_RS03955Q9T1R1-852717 - 85318117160.3
hypothetical proteinSBG_RS22860Not Available-853514 - 85386112934.8

Displaying genes 1 – 10 of 761 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

99 records
Metabolite IDMetabolite nameStructureCAS number
BASm0010135Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]3C30H22FeN3O16Chemical structure of Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]3Not available
Average736.358Da
Monoisotopic736.037137Da
BASm0010136Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]2C20H15FeN2O11Chemical structure of Fe(III)-[N-(2,3-dihydroxybenzoyl)-L-serine]2Not available
Average515.189Da
Monoisotopic515.003617Da
BASm00102688-oxo-GDPC10H12N5O12P2Chemical structure of 8-oxo-GDPNot available
Average456.178Da
Monoisotopic455.997415582Da
BASm00106538-oxo-GMPC10H12N5O9PChemical structure of 8-oxo-GMPNot available
Average377.207Da
Monoisotopic377.038361144Da
BASm00107383-phosphoshikimateC7H8O8PChemical structure of 3-phosphoshikimateNot available
Average251.108Da
Monoisotopic250.997324955Da
BASm0011145(3Z,5E)-dodecadienoyl-CoAC33H50N7O17P3SChemical structure of (3Z,5E)-dodecadienoyl-CoANot available
Average941.78Da
Monoisotopic941.221869666Da
BASm0011146(3Z,5E)-dodecadienoateC12H19O2Chemical structure of (3Z,5E)-dodecadienoateNot available
Average195.283Da
Monoisotopic195.139053432Da
BASm00111563-hydroxydodecanoyl-CoAC33H54N7O18P3SChemical structure of 3-hydroxydodecanoyl-CoANot available
Average961.81Da
Monoisotopic961.248084414Da
BASm0012597(6R)-10-formyltetrahydrofolateC20H21N7O7Chemical structure of (6R)-10-formyltetrahydrofolateNot available
Average471.431Da
Monoisotopic471.151343204Da

Displaying 91–99 of 99 metabolites