Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema primitia |
| Strain | ZAS-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Termite |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1001990 bp
Thymine Count
993941 bp
Guanine Count
1031028 bp
Cytosine Count
1032908 bp
Genome Length
4059867 bp
Protein-coding Genes
3497 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | TREPR_RS00010 | Not Available | + | 301 - 1740 | 54311.2 |
| dna polymerase iii subunit beta | TREPR_RS00015 | Not Available | + | 1938 - 3041 | 41719.6 |
| dna replication/repair protein recf | TREPR_RS00020 | Not Available | + | 3065 - 4174 | 42149.3 |
| duf721 domain-containing protein | TREPR_RS00025 | Not Available | + | 4171 - 4749 | 20756.2 |
| hypothetical protein | TREPR_RS00030 | Not Available | + | 4753 - 5961 | 44025.8 |
| hypothetical protein | TREPR_RS00035 | Not Available | - | 6003 - 6791 | 29493.5 |
| rsme family rna methyltransferase | TREPR_RS00040 | Not Available | - | 6801 - 7661 | 30861.2 |
| sugar abc transporter atp-binding protein | TREPR_RS00045 | Not Available | + | 7819 - 9312 | 54883.8 |
| abc transporter permease | TREPR_RS00050 | Not Available | + | 9328 - 10293 | 32698.1 |
| abc transporter substrate-binding protein | TREPR_RS00055 | Not Available | + | 10349 - 11290 | 32975.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
