Desulfotomaculum nigrificans CO-1-SRB

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfotomaculaceae

Genus

Desulfotomaculum

Description

Desulfotomaculum nigrificans CO-1-SRB is a Gram-positive, rod-shaped, spore-forming bacterium that thrives under anaerobic conditions, with an optimal growth temperature of 45.0°C. This organism is part of the sulfate-reducing bacteria group, which plays a crucial role in the biogeochemical cycling of sulfur in various anaerobic environments. Its ability to form spores suggests a mechanism for surviving unfavorable conditions, enabling it to endure periods of nutrient scarcity or adverse environmental changes. The preference for elevated temperatures indicates that D. nigrificans CO-1-SRB may inhabit geothermal or thermophilic environments, where it contributes to the degradation of organic matter and the reduction of sulfate to sulfide. This metabolic activity not only influences the sulfur cycle but also has implications for the overall ecosystem dynamics in its native habitat, potentially affecting the availability of nutrients and the composition of microbial communities. Furthermore, the anaerobic nature of this bacterium implies that it may play a vital role in environments devoid of oxygen, such as deep-sea sediments, marshlands, or anaerobic digesters, where it can interact with other microbial populations. The study of D. nigrificans CO-1-SRB may provide insights into the evolutionary adaptations of microorganisms to extreme conditions and their functional contributions to ecosystem resilience and stability.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfotomaculaceae
GenusDesulfotomaculum
SpeciesDesulfotomaculum nigrificans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature45
Temperature rangethermophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfotomaculum nigrificans CO-1-SRB


Gene Summary

Adenine Count

772092 bp

Thymine Count

771626 bp

Guanine Count

674126 bp

Cytosine Count

674411 bp

Genome Length

2892255 bp

Protein-coding Genes

2772 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nad(+) synthaseDESCA_RS06460Not Available+1359071 - 135980226863.5
yebc/pmpr family dna-binding transcriptional regulatorDESCA_RS06465Not Available+1359947 - 136068126825.7
hypothetical proteinDESCA_RS06470Not Available+1360782 - 136139623028.7
crossover junction endodeoxyribonuclease ruvcDESCA_RS06475Not Available+1361512 - 136200317746.6
holliday junction branch migration protein ruvaDESCA_RS06480Not Available+1362000 - 136259921106.1
holliday junction branch migration dna helicase ruvbDESCA_RS06485Not Available+1362612 - 136364637963.8
is1380 family transposaseDESCA_RS06490Not Available-1363916 - 136531953817.8
epoxyqueuosine reductase quehDESCA_RS06495Not Available+1365466 - 136603222673.9
duf2905 domain-containing proteinDESCA_RS06500Not Available+1366033 - 13662578085.6
spoiid/lytb domain-containing proteinDESCA_RS06505Not Available+1366378 - 136779651608.1

Displaying genes 1311 – 1320 of 2867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da

Displaying 1–1 of 1 metabolites