Desulfobacca acetoxidans DSM 11109

Gram-negativeNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobaccia

Order

Desulfobaccales

Family

Desulfobaccaceae

Genus

Desulfobacca

Description

Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) is an anaerobic, mesophilic, sulfate reducer, Gram-negative bacterium isolated from granular sludge of a laboratory-scale upflow anaerobic sludge bed reactor fed with acetate (as sole carbon and energy source) and sulfate. The bacterium is oval-shaped, 1.3 x 1.9-2.2 microns.The optimum growth with acetate occurs around 37 degrees Celsius in freshwater medium. Enzyme studies indicates that acetate is oxidized via the carbon monoxide dehydrogenase pathway. Growth is not supported by other organic acids, such as propionate, butyrate or lactate, alcohols such as ethanol or propanol, and hydrogen or formate. Sulfite and thiosulfate are also used as electron acceptors, but sulfur and nitrate are not reduced. Sulfate-reducing bacteria play an important role in the degradation of organic matter in anaerobic bioreactors treating sulfate-rich wastewaters, such as those from paper mills, tanneries or food oil industry. (Adapted from PMID: 10319454). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobaccia
OrderDesulfobaccales
FamilyDesulfobaccaceae
GenusDesulfobacca
SpeciesDesulfobacca acetoxidans
StrainDSM 11109

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water- Sludge
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs
SporulationNonsporulating
Energy sourceOrganoheterotroph
PathogenicityNo

Genome Summary

Desulfobacca acetoxidans DSM 11109


Gene Summary

Adenine Count

772547 bp

Thymine Count

773819 bp

Guanine Count

868763 bp

Cytosine Count

867407 bp

Genome Length

3282536 bp

Protein-coding Genes

2917 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
methylenetetrahydrofolate reductase c-terminal domain-containing proteinDESAC_RS00175Not Available-40551 - 4122224629.8
hydrogenase iron-sulfur subunitDESAC_RS00180Not Available-41243 - 4167115762.2
malate dehydrogenaseDESAC_RS00185Not Available-42446 - 4338132965.5
sulfite exporter taue/safe family proteinDESAC_RS00190Not Available+43758 - 4455527953.4
hypothetical proteinDESAC_RS00195Not Available+44828 - 4524414872.7
s-adenosyl-l-methionine hydroxide adenosyltransferase family proteinDESAC_RS00200Not Available+45248 - 4608429682.1
glycoside hydrolase family 15 proteinDESAC_RS00205Not Available+46074 - 4813477638.4
thermonuclease family proteinDESAC_RS00210Not Available-48226 - 4881322302.8
udp-glucuronic acid decarboxylase family proteinDESAC_RS00215Not Available-48854 - 4981035799.4
Trna-argNot AvailableNot Available+50006 - 50082Not Available

Displaying genes 51 – 60 of 2981 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites