Intrasporangium calvum DSM 43043

Gram-positiveFilamentousMotileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Intrasporangium

Description

Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) is an airborne Gram-negative bacterium isolated from under nonselective conditions on plates of meat-peptone agar exposed to the atmosphere of a school dining room (1967). The name Intrasporangium, was selected to emphasize the possibility of intercalary formation of sporangia in mycelial filaments. I. calvum forms a branching mycelium, which tends to break into irregular fragments. The mycelium may bear intercalary vesicles but does not contain spores. The vesicles are ovoid and lemon-shaped. The mycelial filaments penetrate the agar and form compact, small colonies. I. calvum is able to grow between 28 and 37 degrees Celsius, however, the cells grow faster at 37 degrees Celsius than 28 degrees Celsius, but it does not at 45 degrees Celsius. It is able to reduce nitrate to nitrite when KNO3 is added to the growth medium. One particularly interesting feature of I. calvum is that the type of its menaquinone is different from all other representatives of the family Intrasporangiaceae. (Adapted from PMID: 21304734). (HAMAP: INTC7)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusIntrasporangium
SpeciesIntrasporangium calvum
StrainDSM 43043

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature29
Temperature rangeMesophilic
HabitatAir
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Intrasporangium calvum DSM 43043


Gene Summary

Adenine Count

588356 bp

Thymine Count

590641 bp

Guanine Count

1425537 bp

Cytosine Count

1419848 bp

Genome Length

4024382 bp

Protein-coding Genes

3647 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaINTCA_RS00005Not Available+194 - 193364453.3
dna polymerase iii subunit betaINTCA_RS00010Not Available+2567 - 369439496.0
phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating)INTCA_RS00015Not Available+3881 - 500540225.3
dna replication/repair protein recfINTCA_RS00020Not Available+5015 - 628945452.1
duf721 domain-containing proteinINTCA_RS00025Not Available+6399 - 693218704.1
protealysin inhibitor emfourinINTCA_RS00030Not Available+7081 - 860453693.4
hypothetical proteinINTCA_RS00035Not Available-8714 - 1003945844.6
sige family rna polymerase sigma factorINTCA_RS00040Not Available-10036 - 1054519052.7
dna topoisomerase (atp-hydrolyzing) subunit bINTCA_RS00045Not Available+11006 - 1303074271.0
dna gyrase subunit aINTCA_RS00050Not Available+13281 - 1589096293.8

Displaying genes 1 – 10 of 3705 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites