Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Rice |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Herbaspirillum seropedicae SmR1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | HSERO_RS01055 | Not Available | - | 223750 - 224820 | 39401.6 |
| Gp20, phage tail protein x | HSERO_RS01060 | Not Available | - | 224808 - 225047 | 8859.6 |
| Gp45 | HSERO_RS01065 | Not Available | - | 225044 - 225634 | 21577.9 |
| Bacteriophage tail protein gpt | HSERO_RS01070 | Not Available | - | 225634 - 227973 | 81619.9 |
| Gp15 | HSERO_RS01075 | Not Available | - | 228196 - 228453 | 9654.61 |
| Gp14, phage major tail tube protein | HSERO_RS01080 | Not Available | - | 228457 - 228981 | 19548.5 |
| Major tail sheath protein | HSERO_RS01085 | Not Available | - | 229013 - 230455 | 51030.5 |
| Gp12 | HSERO_RS01090 | Not Available | - | 230491 - 230679 | 6868.12 |
| Putative ci repressor | HSERO_RS24070 | Not Available | - | 230920 - 231726 | 29677.8 |
| Bcepmu gp16 family phage-associated protein | HSERO_RS01100 | Not Available | + | 231806 - 231997 | 7157.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

