Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1

Gram-positiveRodNon-motileFacultative

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Propionibacterium

Description

All members of the genus Propionibacterium produce propionic acid as a major metabolic end-product; however they are divided into 2 groups, a cutaneous group (which can cause acne) and a dairy group used in cheese production. P.freudenreichii has been long used in Emmental-type cheese ripening, where it drives fermentation of lactate into propionate, acetate and CO(2), resulting in holes. It also plays a role in flavor development of these cheeses. P.freudenreichii are also used in the production of vitamin B12, and strains that overproduce this vitamin have been developed. Additionally as a producer of bifidogenic compounds it stimulates growth of bifidobacteria, which are beneficial to humans. The genome sequence of strain CIRM-BIA1 (other synonyms DSM 4902 / NCIB 8099 / VPI 0405) has 22 insertion sequences, 72 different transposases and a few prophages. No pathogenicity factors from the related acne-causing P.acnes were detected in P.freundenreichii. It is able to synthesize all amino acids and nucleotides, and all vitamins except pantothenate and biotin; while the thiamine pathway seems complete this bacteria requires thiamine for growth. This bacteria grows only poorly in milk, and grows in cheese mainly due to its ability to ferment lactic acid anaerobically. It can survive the cheese cooking step (heating to 54 degrees Celsius for about 30 minutes) in a strain dependent fashion (adapted from PMID 20668525). (HAMAP: PROFC)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusPropionibacterium
SpeciesPropionibacterium freudenreichii
StrainCIRM-BIA1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1


Gene Summary

Adenine Count

428064 bp

Thymine Count

428381 bp

Guanine Count

878125 bp

Cytosine Count

881814 bp

Genome Length

2616384 bp

Protein-coding Genes

2282 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaPFREUD_RS00005Not Available+232 - 170755174.2
dha2 family efflux mfs transporter permease subunitPFREUD_RS00010Not Available-1682 - 315150366.0
merr family transcriptional regulatorPFREUD_RS00015Not Available+3393 - 401022354.8
glycosyltransferase family 4 proteinPFREUD_RS00020Not Available-4007 - 518842696.7
nad-dependent epimerase/dehydratase family proteinPFREUD_RS00025Not Available-5202 - 644945725.2
abc transporter atp-binding proteinPFREUD_RS00030Not Available+7083 - 786527442.7
abc transporter permeasePFREUD_RS00035Not Available+7894 - 1042587129.4
dna polymerase iii subunit betaPFREUD_RS00040Not Available+12301 - 1346141527.7
dna replication/repair protein recfPFREUD_RS00045Not Available+13535 - 1483646613.4
duf721 domain-containing proteinPFREUD_RS13025Not Available+15090 - 1561119209.9

Displaying genes 1 – 10 of 2336 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites