Thermobispora bispora DSM 43833

Gram-positiveFilamentousMotileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Streptosporangiaceae

Genus

Thermobispora

Description

Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) is an aerobic, thermophilic Gram-positive bacterium isolated from decaying manure. It grows at an optimum temperature between 55 and 65 degrees. (adapted from: http://www.ncbi.nlm.nih.gov/genomeprj?Db=genomeprj&cmd=ShowDetailView&TermToSearch=48999). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyStreptosporangiaceae
GenusThermobispora
SpeciesThermobispora bispora
StrainDSM 43833

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityYes
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature45
Temperature rangeThermophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Thermobispora bispora DSM 43833

NC_014165.1

Gene Summary

Adenine Count

577496 bp

Thymine Count

577715 bp

Guanine Count

1515332 bp

Cytosine Count

1519433 bp

Genome Length

4189976 bp

Protein-coding Genes

3556 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaTBIS_RS00010Not Available+270 - 185358365.3
dna polymerase iii subunit betaTBIS_RS00015Not Available+2390 - 352640305.5
phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating)TBIS_RS00020Not Available+3637 - 458133595.1
dna replication/repair protein recfTBIS_RS00025Not Available+4719 - 592442953.3
duf721 domain-containing proteinTBIS_RS00030Not Available+5914 - 646519244.8
dna topoisomerase (atp-hydrolyzing) subunit bTBIS_RS00035Not Available+6961 - 890472019.2
dna gyrase subunit aTBIS_RS00040Not Available+8933 - 1143792906.5
duf3566 domain-containing proteinTBIS_RS18395Not Available+11529 - 1235327880.8
Trna-ileNot AvailableNot Available+12504 - 12577Not Available
ynfa family proteinTBIS_RS00055Not Available-12943 - 1327511818.7

Displaying genes 1 – 10 of 3622 in total

Metabolites

765 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 765 metabolites