Denitrovibrio acetiphilus DSM 12809

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Deferribacterota

Class

Deferribacteres

Order

Deferribacterales

Family

Geovibrionaceae

Genus

Denitrovibrio

Description

Denitrovibrio acetiphilus (strain DSM 12809 / N2460) is an obligatory anaerobic, dissimilatory nitrate-reducing Gram-negative bacterium isolated from an oil reservoir modeling column under nitrate enrichment in Norway. The cells are vibrio shaped and motile by a bipolar flagellum. D. acetiphilus grows well on acetate with nitrate as electron acceptor, producing ammonia. The presence of a 2-oxoglutarate dehydrogenase activity indicates that acetate is oxidized via the citric acid cycle. It grows at temperatures between 4 and 40 degrees Celsius and at a pH between 6.5 and 8.6. The optimum temperature is 35-37 degrees Celsius and no growth is obtained at 45 degrees Celsius. NaCl is not required for growth and D.acetiphilus grows well in medium containing up to 6% NaCl. (adapted from PMID: 10939668). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumDeferribacterota
ClassDeferribacteres
OrderDeferribacterales
FamilyGeovibrionaceae
GenusDenitrovibrio
SpeciesDenitrovibrio acetiphilus
StrainDSM 12809

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Denitrovibrio acetiphilus DSM 12809
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature35
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Denitrovibrio acetiphilus DSM 12809


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaDACET_RS00010Not Available+36 - 137650443.8
hypothetical proteinDACET_RS16160Not Available+1438 - 16537758.21
ll-diaminopimelate aminotransferaseDACET_RS00020Not Available-1694 - 292345915.2
cation diffusion facilitator family transporterDACET_RS00025Not Available-2920 - 384334005.4
duf2232 domain-containing proteinDACET_RS00030Not Available-3834 - 473634140.4
30s ribosomal protein s18DACET_RS16085Not Available-4787 - 50178970.33
single-stranded dna-binding proteinDACET_RS16090Not Available-5027 - 542214969.7
30s ribosomal protein s6DACET_RS15250Not Available-5445 - 598720641.9
rlua family pseudouridine synthaseDACET_RS00050Not Available+6273 - 718134219.5
nadh-quinone oxidoreductase subunit aDACET_RS00055Not Available+7333 - 768613520.2

Displaying genes 1 – 10 of 3081 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites