Kribbella flavida DSM 17836

Gram-positiveBacilliMotileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Kribbellaceae

Genus

Kribbella

Description

Kribbella flavida (strainDSM 17836 / JCM 10339 / NBRC 14399) is a strictly aerobic Gram-positive bacterium isolated from soil in China. It possesses a vegetative aerial mycelium which consists of hyphae extensively branched that fragment into short to elongated rod-like elements. The colonies are pasty and have lichenous shapes with irregular edges. K.flavida utilizes glucose, cellobiose, maltose, melibiose as a sole carbon and energy sources, but is not able to hydrolyze starch. Growth occurs at pH 5 and 9 and at 20 and 37 degrees Celsius. It activity is weak at 40 degrees Celsius and growth does not occur at 45 degrees Celsius. (Adapted from PMID: 10319498). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyKribbellaceae
GenusKribbella
SpeciesKribbella flavida
StrainDSM 17836

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Kribbella flavida DSM 17836
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Kribbella flavida DSM 17836

NC_013729.1

Gene Summary

Adenine Count

1119321 bp

Thymine Count

1111481 bp

Guanine Count

2664338 bp

Cytosine Count

2684348 bp

Genome Length

7579488 bp

Protein-coding Genes

7069 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaKFLA_RS00010Not Available+588 - 215658698.4
dna polymerase iii subunit betaKFLA_RS00015Not Available+2689 - 383440067.6
phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating)KFLA_RS00020Not Available+3881 - 479532584.8
dna replication/repair protein recfKFLA_RS00025Not Available+4797 - 593641378.6
duf721 domain-containing proteinKFLA_RS00030Not Available+5983 - 651319362.0
hypothetical proteinKFLA_RS00035Not Available+6769 - 809149202.0
hypothetical proteinKFLA_RS00040Not Available-8143 - 870320731.1
hypothetical proteinKFLA_RS00045Not Available-8700 - 929020961.7
hypothetical proteinKFLA_RS00050Not Available-9287 - 991923032.4
dna topoisomerase (atp-hydrolyzing) subunit bKFLA_RS00055Not Available+10290 - 1229672943.2

Displaying genes 1 – 10 of 7132 in total

Metabolites

8 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00024581D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranosideC14H25NO11Chemical structure of 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranosideNot available
Average383.35Da
Monoisotopic383.142760629Da
BASm00037771D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideC15H29N2O11SChemical structure of 1D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideNot available
Average445.46Da
Monoisotopic445.1486574Da
BASm00037801D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphateC14H24NO14PChemical structure of 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphateNot available
Average461.314Da
Monoisotopic461.094538615Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0016750X-14847C12H23NO10Chemical structure of X-14847NULL
Average341.313Da
Monoisotopic341.132195945Da
BASm0017265Uridine diphosphate-N-acetylglucosamineC17H27N3O17P2Chemical structure of Uridine diphosphate-N-acetylglucosamine528-04-1
Average607.3537Da
Monoisotopic607.081569477Da

Displaying 1–8 of 8 metabolites