Gardnerella vaginalis 409-05

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Gardnerella

Description

Gardnerella vaginalis (strain 409-05) is a facultative anaerobic Gram-variable bacterium. It is the most prevalent sexually transmitted organism and is associated with bacterial vaginosis (BV) in which the normal lactobacilli microbiota is replaced by relatively high concentrations of other bacteria, especially G. vaginalis. It reflects a complex alteration of the vaginal microbiota, normally in the absence of inflammatory response. It generally leads to the presence of intense discharges in the absence of itching, burning sensations or urinary symptoms. G. vaginalis was found to be a risk factor for the acquisition of human immunodeficiency virus (HIV), in which stimulation of HIV expression by G. vaginalis was demonstrated. This bacterium is also associated with bacteraemia, urinary track infections, and neonatal meningitis. (Adaptated from PMID: 20221621). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusGardnerella
SpeciesGardnerella vaginalis
Strain409-05

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Gardnerella vaginalis 409-05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityYes

Genome Summary

Gardnerella vaginalis 409-05


Gene Summary

Adenine Count

469835 bp

Thymine Count

468076 bp

Guanine Count

341853 bp

Cytosine Count

337780 bp

Genome Length

1617545 bp

Protein-coding Genes

1252 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase small subunitHMPREF0424_RS04785Not Available+1115133 - 111565719152.8
Terminase large subunitHMPREF0424_RS04790Not Available+1115647 - 111677741933.1
Terminase large subunitHMPREF0424_RS04795Not Available+1116774 - 111743325087.7
Portal proteinHMPREF0424_RS04800Not Available+1117430 - 111880651243.4
Capsid maturation proteaseHMPREF0424_RS04805Not Available+1118796 - 111994142496.5
Gp26HMPREF0424_RS04810Not Available+1119969 - 112059223011.8
P22 coat protein 5HMPREF0424_RS04815Not Available+1120610 - 112146431051.0
Head-to-tail adaptorHMPREF0424_RS04820Not Available+1121467 - 112204520807.9
duf6093 family proteinHMPREF0424_RS04825Not Available+1122042 - 112250616642.8
Hypothetical proteinHMPREF0424_RS04830Not Available+1122493 - 112286413968.7

Displaying genes 1 – 10 of 1319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites