Sebaldella termitidis ATCC 33386

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Leptotrichiaceae

Genus

Sebaldella

Description

Sebaldella termitidis (strain ATCC 33386 / NCTC 11300), formerly Bacteroides termitidis, is an uricolytic, obligately anaerobic Gram-negative bacterium isolated from the termite intestine. It is nonmotile and has rod-shaped cells with central swellings that occur singly, in pairs, and in filaments. Surface colonies are 1 to 2 mm in diameter, circular, and transparent to opaque. Colonies in deep agar are lenticular and nonpigmented. This organism is able to degrade uric acid to CO2, acetate, and ammonia, and may play a role in providing nitrogen to the termite host. Acetic and lactic acids are the major end products of glucose metabolism; formic acid may also be produced. Acid is produced from glucose, fructose, maltose, mannitol, mannose, rhamnose, sucrose, trehalose, and xylose. (Adaptated from: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=29539). (EBI Integr8)

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyLeptotrichiaceae
GenusSebaldella
SpeciesSebaldella termitidis
StrainATCC 33386

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sebaldella termitidis ATCC 33386
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Termite
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Sebaldella termitidis ATCC 33386

NC_013519.1NC_013518.1

Gene Summary

Adenine Count

5604 bp

Thymine Count

4034 bp

Guanine Count

2290 bp

Cytosine Count

1720 bp

Genome Length

13648 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinSTERM_RS20855Not Available+92 - 42112548.1
hypothetical proteinSTERM_RS20860Not Available+704 - 103913253.9
helix-turn-helix domain-containing proteinSTERM_RS20865Not Available+1159 - 160517251.7
hypothetical proteinSTERM_RS20870Not Available+1636 - 198313368.3
tyrosine-type recombinase/integraseSTERM_RS20875Not Available+3078 - 389331373.5
hypothetical proteinSTERM_RS20880Not Available+3903 - 431916476.2
hypothetical proteinSTERM_RS20885Not Available+4878 - 563029932.0
hypothetical proteinSTERM_RS20890Not Available+5617 - 661538916.2
dnab-like helicase c-terminal domain-containing proteinSTERM_RS20895Not Available+7273 - 906968774.9
hypothetical proteinSTERM_RS20900Not Available+9162 - 971021664.1

Displaying genes 1 – 10 of 69 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1652 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 1652 metabolites