Leptotrichia buccalis C-1013-b

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Leptotrichiaceae

Genus

Leptotrichia

Description

Species of Leptotrichia are large, fusiform, non-motile, non-sporulating rods, which often populate the human oral flora as well as the female genitourinary tract and the intestinal tract. Recognized in the 1800s, it was among the first bacteria to be described and drawn in the letters of Antoni van Leeuwenhoek. L. buccalis is anaerobic to aerotolerant, and saccharolytic. Older cells of strain C-1013-b are Gram-negative, but younger cells that have been in culture for less than six hours are Gram-positive while on first isolation, it is anaerobic but becomes aerotolerant upon transfer and grows in the presence of air and CO(2) (adapted from http://standardsingenomics.org/index.php/sigen/article/view/sigs1854/74). (HAMAP: LEPBD)

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyLeptotrichiaceae
GenusLeptotrichia
SpeciesLeptotrichia buccalis
StrainDSM 1135

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Leptotrichia buccalis C-1013-b
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementChains- Filaments
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo?

Genome Summary

Leptotrichia buccalis C-1013-b

Accession NumberNC_013192.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2293 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaLEBU_RS00010Not Available+687 - 204251864.9
s4 domain-containing protein yaaaLEBU_RS00015Not Available+2732 - 29598483.19
aaa family atpaseLEBU_RS00020Not Available+3032 - 466964305.0
dna replication/repair protein recfLEBU_RS00025Not Available+4697 - 578542946.3
dcia family proteinLEBU_RS00030Not Available+5800 - 684341475.1
spherulation-specific family 4 proteinLEBU_RS00035Not Available+7045 - 783629988.9
tetratricopeptide repeat proteinLEBU_RS00040Not Available+7915 - 895241367.8
hypothetical proteinLEBU_RS00045Not Available+8979 - 989337170.5
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgLEBU_RS00050Not Available+10638 - 1253070829.2
eama family transporterLEBU_RS12335Not Available+12752 - 1360930967.0

Displaying genes 1 – 10 of 2358 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

263 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017378UDP-N-Acetylmuramoyl-L-alanyl-D-glutamateC22H32Cl2N2O4Chemical structure of UDP-N-Acetylmuramoyl-L-alanyl-D-glutamate17088-64-1
Average459.41Da
Monoisotopic458.1739129Da
BASm0017382Deoxythymidine diphosphate-L-rhamnoseC16H26N2O15P2Chemical structure of Deoxythymidine diphosphate-L-rhamnose2147-59-3
Average548.3296Da
Monoisotopic548.080841196Da
BASm0017385ADP-GlucoseC16H25N5O15P2Chemical structure of ADP-Glucose2140-58-1
Average589.3417Da
Monoisotopic589.082238179Da
BASm0017387O-Phospho-4-hydroxy-L-threonineC4H10NO7PChemical structure of O-Phospho-4-hydroxy-L-threonineNULL
Average215.0985Da
Monoisotopic215.019488191Da
BASm00173882,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidineC9H18N5O14P3Chemical structure of 2,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidineNULL
Average513.1856Da
Monoisotopic513.006309845Da
BASm0017389(S)-2-AcetolactateC5H8O4Chemical structure of (S)-2-AcetolactateNULL
Average132.1146Da
Monoisotopic132.042258744Da
BASm0017391Adenosyl cobinamideC58H84CoN16O11Chemical structure of Adenosyl cobinamideNULL
Average1240.3214Da
Monoisotopic1239.583747804Da
BASm0017450(R) 2,3-Dihydroxy-3-methylvalerateC6H12O4Chemical structure of (R) 2,3-Dihydroxy-3-methylvalerate562-43-6
Average148.1571Da
Monoisotopic148.073558872Da
BASm0017452Adenosyl cobinamide phosphateC58H85CoN16O14PChemical structure of Adenosyl cobinamide phosphateNULL
Average1320.3013Da
Monoisotopic1319.550078214Da
BASm00174872-Amino-3-oxo-4-phosphonooxybutyrateC4H8NO7PChemical structure of 2-Amino-3-oxo-4-phosphonooxybutyrateNULL
Average213.0826Da
Monoisotopic213.003838127Da

Displaying 131–140 of 263 metabolites