Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Capnocytophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Capnocytophaga |
| Species | Capnocytophaga ochracea |
| Strain | DSM 7271 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Chains - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
789447 bp
Thymine Count
789074 bp
Guanine Count
517190 bp
Cytosine Count
517214 bp
Genome Length
2612925 bp
Protein-coding Genes
2165 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | + | 6409 - 6481 | Not Available |
| rna methyltransferase | COCH_RS00035 | Not Available | - | 6540 - 7082 | 20215.4 |
| rela/spot family protein | COCH_RS00040 | Not Available | - | 7084 - 9282 | 83773.6 |
| 3'-5' exonuclease | COCH_RS00045 | Not Available | - | 9313 - 10089 | 29377.1 |
| atp-dependent clp protease adaptor clps | COCH_RS00050 | Not Available | - | 10141 - 10431 | 10898.8 |
| hypothetical protein | COCH_RS00055 | Not Available | - | 10584 - 11051 | 17214.6 |
| duf3644 domain-containing protein | COCH_RS00060 | Not Available | - | 11210 - 12190 | 39349.2 |
| potassium channel family protein | COCH_RS00065 | Not Available | - | 12654 - 13304 | 24194.6 |
| trkh family potassium uptake protein | COCH_RS00070 | Not Available | - | 13308 - 14636 | 49024.4 |
| mechanosensitive ion channel family protein | COCH_RS00075 | Not Available | - | 14649 - 15518 | 32617.4 |
Pathways
393 pathways


