Flavobacteriaceae bacterium 3519-10

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Description

Flavobacteriaceae bacterium (strain 3519-10) was isolated from glacial ice at a depth of 3519 m, just above the accreted ice from Subglacial Lake Vostok, the largest subglacial lake in Antarctica. Ice at this depth is near the bottom of a layer of deformed glacial ice and is more than 420,000 years old. It is less than 20 m above the layer of accretion ice originating from Subglacial Lake Vostok and has a temperature of approximately -8 degrees Celsius. This bacterium produces a 54 kDa ice-binding protein that is similar to ice-binding proteins previously found in sea ice diatoms, a snow mold, and a sea ice bacterium. The protein has the ability to inhibit the recrystallization of ice, a phenotype that has clear advantages for survival in ice (adapted from PMID 18622572). (EBI Integr8)

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Flavobacteriaceae bacterium 3519-10


Gene Summary

Adenine Count

794418 bp

Thymine Count

791904 bp

Guanine Count

591208 bp

Cytosine Count

590571 bp

Genome Length

2768102 bp

Protein-coding Genes

2477 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ribose 5-phosphate isomerase bFIC_RS00010Not Available+706 - 113415783.9
ribonuclease rFIC_RS00015Not Available+1162 - 331881958.4
lyse family translocatorFIC_RS00020Not Available+3367 - 404425783.4
s66 peptidase family proteinFIC_RS00025Not Available+4044 - 497334410.0
maue/doxx family redox-associated membrane proteinFIC_RS00030Not Available+4973 - 533213648.6
yran family proteinFIC_RS00035Not Available+5332 - 570314183.9
sdr family nad(p)-dependent oxidoreductaseFIC_RS00040Not Available+5716 - 646827331.5
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabFIC_RS00045Not Available+6514 - 719425111.9
tetratricopeptide repeat proteinFIC_RS00050Not Available-7208 - 971593741.7
glutamyl-trna reductaseFIC_RS00055Not Available+10062 - 1133648826.6

Displaying genes 1 – 10 of 2528 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites