Methylovorus glucosotrophus SIP3-4

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Methylophilaceae

Genus

Methylovorus

Description

Methylovorus glucosotrophus SIP3-4 is a Gram-negative, rod-shaped bacterium that exhibits methylotrophic capabilities, utilizing methanol and other one-carbon compounds as its primary energy sources. This nonsporulating microbe thrives in aerobic aquatic environments, where it plays a role in the biogeochemical cycling of carbon. The methylotrophic metabolism of M. glucosotrophus SIP3-4 enables it to contribute to the degradation of methanol and possibly other methylated compounds, which can be prevalent in certain aquatic ecosystems due to natural processes or anthropogenic activities. Its ability to utilize these compounds not only underscores the ecological importance of this organism in nutrient cycling but also highlights its potential role in bioremediation strategies aimed at mitigating pollution in aquatic habitats. Understanding the physiology and metabolic pathways of M. glucosotrophus SIP3-4 enhances our knowledge of microbial interactions in aquatic ecosystems and may provide insights into the functional diversity of methylotrophic bacteria. This knowledge can be pivotal when considering the role of such organisms in maintaining ecological balance and the health of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyMethylophilaceae
GenusMethylovorus
SpeciesMethylovorus glucosotrophus
StrainSIP3-4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy source Methylotroph
PathogenicityNot Available

Genome Summary

Methylovorus glucosotrophus SIP3-4


Gene Summary

Adenine Count

20409 bp

Thymine Count

21219 bp

Guanine Count

16877 bp

Cytosine Count

18175 bp

Genome Length

76680 bp

Protein-coding Genes

76 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
site-specific integraseMSIP34_RS14195Not Available-330 - 147243370.0
helix-turn-helix domain-containing proteinMSIP34_RS14200Not Available-1475 - 17088714.46
hypothetical proteinMSIP34_RS14720Not Available-1850 - 293540085.7
helix-turn-helix domain-containing proteinMSIP34_RS14210Not Available-3117 - 33268010.68
replication initiation proteinMSIP34_RS14215Not Available+4133 - 546150632.3
hypothetical proteinMSIP34_RS14220Not Available-5699 - 601311941.5
hypothetical proteinMSIP34_RS14225Not Available-6054 - 708237867.6
hypothetical proteinMSIP34_RS14230Not Available-7097 - 783726890.3
stbb family proteinMSIP34_RS14235Not Available-7862 - 862928512.2
hypothetical proteinMSIP34_RS14240Not Available-8738 - 941525049.7

Displaying genes 1 – 10 of 76 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1668 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 1668 metabolites