Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative holin | PC1_RS11445 | Not Available | - | 2649663 - 2649905 | 8684.9 |
| Endolysin | PC1_RS11450 | Not Available | - | 2650089 - 2650805 | 26276.2 |
| tigr02642 family protein | PC1_RS11455 | Not Available | - | 2650964 - 2651770 | 30280.7 |
| hypothetical protein | PC1_RS11460 | Not Available | + | 2651848 - 2652723 | 33371.6 |
| duf3427 domain-containing protein | PC1_RS22355 | Not Available | - | 2653078 - 2654865 | 68260.7 |
| Hypothetical protein | PC1_RS21840 | Not Available | - | 2654888 - 2655139 | 9326.9 |
| Hypothetical protein | PC1_RS11470 | Not Available | - | 2655188 - 2655835 | 24599.6 |
| Attr | Not Available | Not Available | + | 2655908 - 2655919 | Not Available |
| Integrase | PC1_RS11475 | Not Available | + | 2655999 - 2656853 | 32325.0 |
| Diguanylate cyclase | PC1_RS12980 | Not Available | + | 2986224 - 2987639 | 53577.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.