Solidesulfovibrio magneticus RS-1

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Solidesulfovibrio

Description

Solidesulfovibrio magneticus RS-1 is a Gram-negative, magnetotactic bacterium characterized by its ability to orient and migrate along magnetic fields. This unique trait is attributed to the presence of magnetosomes, which are intracellular organelles containing magnetic iron minerals. The bacterium exhibits a distinctive rod-shaped morphology, contributing to its motility in aquatic environments. As a member of the sulfate-reducing bacteria, Solidesulfovibrio magneticus RS-1 plays a significant role in biogeochemical cycles, particularly in sulfur and iron transformations. This microbe utilizes sulfate as a terminal electron acceptor during anaerobic respiration, thereby contributing to the reduction of sulfate to sulfide. The ecological implications of this metabolic pathway are noteworthy, as it influences nutrient cycling and can impact the overall health of sedimentary ecosystems. Furthermore, the magnetotactic behavior of Solidesulfovibrio magneticus RS-1 suggests its potential role in sediment stratification and geomicrobiology. By aligning with geomagnetic fields, this bacterium may enhance its access to nutrients and optimize its habitat within sediment layers. Overall, the unique combination of magnetotaxis and sulfate-reducing capabilities positions Solidesulfovibrio magneticus RS-1 as an important player in both microbial ecology and environmental biogeochemistry.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusSolidesulfovibrio
SpeciesSolidesulfovibrio magneticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solidesulfovibrio magneticus RS-1

Accession NumberNC_012795.1

Gene Summary

Adenine Count

2840 bp

Thymine Count

2731 bp

Guanine Count

1770 bp

Cytosine Count

1526 bp

Genome Length

8867 bp

Protein-coding Genes

12 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dihydroorotaseDMR_RS00355Not Available-75779 - 7707446276.2
aspartate carbamoyltransferase catalytic subunitDMR_RS00360Not Available-77071 - 7801234075.4
sirohydrochlorin cobaltochelataseDMR_RS00365Not Available-78117 - 7892327477.2
cell division protein ftsxDMR_RS00370Not Available-78920 - 7979229782.9
cell division atp-binding protein ftseDMR_RS00375Not Available-79789 - 8048424664.0
dna repair protein recnDMR_RS00380Not Available-80481 - 8210958615.6
abc transporter permeaseDMR_RS00385Not Available-82121 - 8296329526.2
abc transporter permeaseDMR_RS00390Not Available-82956 - 8395436130.2
Trna-alaNot AvailableNot Available+84112 - 84187Not Available
aipr family proteinDMR_RS22810Not Available+84614 - 8631164687.2

Displaying genes 71 – 80 of 4714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

62 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da
BASm0017409PA(16:0/18:1(9Z))C37H71O8PChemical structure of PA(16:0/18:1(9Z))NULL
Average674.941Da
Monoisotopic674.488656244Da
BASm0017415PA(18:1(9Z)/18:1(9Z))C39H73O8PChemical structure of PA(18:1(9Z)/18:1(9Z))14268-17-8
Average700.979Da
Monoisotopic700.504306309Da
BASm0017417PE(14:0/16:0)C35H70NO8PChemical structure of PE(14:0/16:0)NULL
Average663.918Da
Monoisotopic663.483905216Da

Displaying 1–10 of 62 metabolites