Wolbachia sp. wRi

Gram-negativeNon-motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Anaplasmataceae

Genus

Wolbachia

Description

Wolbachia strain TRS is the obligate endosymbiont of the nematode Brugia malayi and is required for fertility and survival of the worm. Brugia malayi as well as Wuchereria bancrofti cause lymphatic filariasis, a disease that affects 120 million people, a third of whom show disfigurement. In nematodes, Wolbachia is located in the lateral chords in both sexes and are also localized in oocytes. The bacterium seems to be present in 100% of individuals within a population, when a species contains them. As they appear to be essential to the worm survival, they represent potential therapeutic targets for filariasis control. Some antibiotics show inhibitory effects on parasitic nematode development and fertility. No antibiotic effects are observed in nematodes that do not harbor Wolbachia. Wolbachia play a role in the host immunological response to filarial parasite invasion. Infection by filarial parasites results in the production of antibodies directed toward parasite- and Wolbachia-specific antigens.(From http://www.expasy.org/sprot/hamap/WOLTR.html) (BacMap)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyAnaplasmataceae
GenusWolbachia
SpeciesWolbachia sp. wRi
StrainwRi

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Wolbachia sp. wRi
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Wolbachia sp. wRi


Gene Summary

Adenine Count

464837 bp

Thymine Count

472600 bp

Guanine Count

249259 bp

Cytosine Count

259177 bp

Genome Length

1445873 bp

Protein-coding Genes

1265 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+58093 - 58104Not Available
Transposase insfWRI_RS07760Not Available-59632 - 597936008.36
Is3 transposase bWRI_RS08140Not Available-59797 - 6023116724.2
transposaseWRI_RS00270Not Available-60216 - 6051811409.9
AttlNot AvailableNot Available+60584 - 60595Not Available
pyridoxine 5'-phosphate synthaseWRI_RS00275Not Available+60655 - 6136226349.8
Putative histone family dna-binding proteinWRI_RS00280Not Available-61355 - 6166611525.0
30s ribosomal protein s9WRI_RS00285Not Available-61813 - 6226816791.2
50s ribosomal protein l13WRI_RS00290Not Available-62279 - 6273717568.5
tolc family proteinWRI_RS00295Not Available+62867 - 6409045395.6

Displaying genes 1 – 10 of 1405 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1554 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da

Displaying 1–10 of 1554 metabolites