Streptococcus uberis 0140J

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Gram-positive nonmotile coccus. Streptococcus uberis is commensal at many body sites and has been isolated from the skin, gut, tonsils and genital tract of asymptomatic cattle. It can infect the bovine mammary gland where it causes mastitis, an inflammatory disease. Infection with S. uberis is one of the major causes of bovine mastitis worldwide and the most common cause in the UK. S.uberis is often detected in feces and can also be isolated from the environment (pasture, bedding materials) populated by cattle. However the organism survives in the environment for less than 4 weeks. It has been placed within the pyogenic cluster, a large grouping containing the human pathogens S.pyogenes, the zoonotic S.agalactiae and a number of animal pathogens occupying diverse ecological niches including S.equi and S.canis.S. uberis strain 0140J represents a typical UK isolate in terms of its ancestry. It is among the most thoroughly characterized strains that is pathogenic for both the lactating and non-lactating bovine mammary gland, environments that are quite different. It encodes a variety of metabolic options useful for benefiting from its various habitats; some of them have probably been acquired by horizontal gene transfer. It encodes a lower number of mobile genetic elements than other pyogenic streptococci (adapted from PubMed 19175920). (HAMAP: STRU0)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus uberis
Strain0140J

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus uberis 0140J
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Bovine
Cell arrangementChains - Pairs
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptococcus uberis 0140J


Gene Summary

Adenine Count

586754 bp

Thymine Count

587048 bp

Guanine Count

339562 bp

Cytosine Count

338988 bp

Genome Length

1852352 bp

Protein-coding Genes

1800 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaSUB_RS00005Not Available+1 - 135651628.7
dna polymerase iii subunit betaSUB_RS00010Not Available+1510 - 264642041.0
duf951 domain-containing proteinSUB_RS00015Not Available+2720 - 29298021.08
helix-turn-helix domain-containing proteinSUB_RS00020Not Available+3036 - 344315729.0
redox-regulated atpase ychfSUB_RS00025Not Available+3524 - 463941192.1
aminoacyl-trna hydrolaseSUB_RS00030Not Available+4712 - 528121365.0
transcription-repair coupling factorSUB_RS00035Not Available+5285 - 8785133872.0
oligosaccharide flippase family proteinSUB_RS00040Not Available+8748 - 1025957271.5
rna-binding s4 domain-containing proteinSUB_RS00045Not Available+10288 - 1056010411.9
ftsb family cell division proteinSUB_RS00050Not Available+10547 - 1091814681.1

Displaying genes 1 – 10 of 1878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

408 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 408 metabolites