Dictyoglomus turgidum DSM 6724

Gram-positiveBacilliAnaerobic

Kingdom

Pseudomonadati

Phylum

Dictyoglomota

Class

Dictyoglomia

Order

Dictyoglomales

Family

Dictyoglomaceae

Genus

Dictyoglomus

Description

Dictyoglomus turgidum (strain Z-1310) is an extremely thermophilic bacterium isolated from a hot spring in the Uzon volcano caldera in Kamchatka. It is the type strain. It degrades cellulose, pectin, starch, but grows only weakly on solid polysaccharides, including microcrystalline cellulose. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumDictyoglomota
ClassDictyoglomia
OrderDictyoglomales
FamilyDictyoglomaceae
GenusDictyoglomus
SpeciesDictyoglomus turgidum
StrainDSM 6724

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature45
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceorganotroph; chemotroph
PathogenicityNo

Genome Summary

Dictyoglomus turgidum DSM 6724

Accession NumberNC_011661.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
protein translocase subunit secfDTUR_RS08285Not Available-1621219 - 162209133190.1
protein translocase subunit secdDTUR_RS08290Not Available-1622109 - 162330843440.3
preprotein translocase subunit yajcDTUR_RS08295Not Available-1623334 - 162361210375.2
trna guanosine(34) transglycosylase tgtDTUR_RS08300Not Available-1623591 - 162475745140.9
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaDTUR_RS08305Not Available-1624771 - 162579038603.1
spoiid/lytb domain-containing proteinDTUR_RS08310Not Available-1625781 - 162687241295.4
duf2905 domain-containing proteinDTUR_RS08315Not Available-1626874 - 16270958556.3
diacylglycerol/lipid kinase family proteinDTUR_RS08320Not Available-1627101 - 162796431913.9
epoxyqueuosine reductase quehDTUR_RS08325Not Available-1627961 - 162850922019.5
holliday junction branch migration dna helicase ruvbDTUR_RS08330Not Available-1628499 - 162950337307.9

Displaying genes 1661 – 1670 of 1877 in total

Pathways

520 pathways
2,3-Dihydroxybenzoate Biosynthesis pathway thumbnail
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides pathway thumbnail
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lysine Biosynthesis pathway thumbnail
Lysine Biosynthesis
Lysine Biosynthesis
Glycolysis and Pyruvate Dehydrogenase pathway thumbnail
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Ornithine Metabolism pathway thumbnail
Ornithine Metabolism
Ornithine Metabolism
Palmitate Biosynthesis pathway thumbnail
Palmitate Biosynthesis
Palmitate Biosynthesis
Fatty Acid Elongation (Saturated) pathway thumbnail
Fatty Acid Elongation (Saturated)
Fatty Acid Elongation (Saturated)
tRNA Charging pathway thumbnail
tRNA Charging
tRNA Charging
Show All 520 Pathways

Metabolites

44 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002231beta-D-glucosyl-(1->4)-D-mannopyranoseC12H22O11Chemical structure of beta-D-glucosyl-(1->4)-D-mannopyranoseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0002243S-methyl-5'-thioinosineC11H14N4O4SChemical structure of S-methyl-5'-thioinosineNot available
Average298.32Da
Monoisotopic298.0735761Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da

Displaying 1–10 of 44 metabolites