Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tail protein x | RPAL_RS03515 | Not Available | + | 733575 - 733811 | 8708.63 |
| Putative transcriptional regulator | RPAL_RS03520 | Not Available | + | 733808 - 734884 | 37790.7 |
| Lipoprotein a | RPAL_RS03525 | Q55752 | + | 734897 - 735313 | 14887.1 |
| hypothetical protein | RPAL_RS03530 | Not Available | + | 735313 - 735660 | 13310.2 |
| Site-specific dna-methyltransferase | RPAL_RS03535 | Not Available | + | 735980 - 736696 | 26094.6 |
| Hypothetical protein | RPAL_RS10415 | P0DV57 | - | 2272138 - 2273175 | 38728.2 |
| duf4433 domain-containing protein | RPAL_RS10420 | P0DV56 | - | 2273187 - 2273858 | 24701.6 |
| hypothetical protein | RPAL_RS10425 | Not Available | + | 2274202 - 2275128 | 33646.6 |
| Terminase large subunit | RPAL_RS10430 | Not Available | + | 2275070 - 2276365 | 47333.5 |
| hypothetical protein | RPAL_RS10435 | Not Available | + | 2276499 - 2276747 | 8605.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.