Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPAL_RS10440 | Not Available | - | 2276767 - 2277075 | 11443.1 |
| trypsin-like serine protease | RPAL_RS10445 | Not Available | - | 2277158 - 2277925 | 25456.6 |
| head-tail connector protein | RPAL_RS10450 | Not Available | + | 2277990 - 2278550 | 19802.0 |
| phage head closure protein | RPAL_RS10455 | Not Available | + | 2278547 - 2278867 | 11433.6 |
| Tail protein | RPAL_RS10460 | Not Available | + | 2278864 - 2279274 | 14743.5 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | RPAL_RS10465 | Not Available | + | 2279287 - 2279694 | 14243.0 |
| gene transfer agent family protein | RPAL_RS10470 | Not Available | + | 2279704 - 2280021 | 10577.6 |
| rcc01693 family protein | RPAL_RS10475 | Not Available | + | 2280018 - 2280221 | 7476.15 |
| Putative bacteriotail tape measure protein | RPAL_RS10480 | Not Available | + | 2280218 - 2280811 | 19782.6 |
| Tail protein | RPAL_RS10485 | Not Available | + | 2280950 - 2281588 | 22582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.