Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ethd domain-containing protein | RPAL_RS26335 | Not Available | - | 5732740 - 5733114 | 14415.1 |
| merr family transcriptional regulator | RPAL_RS26340 | Not Available | + | 5733186 - 5733539 | 13060.1 |
| dna helicase recq | RPAL_RS26345 | P15043 | + | 5733615 - 5735465 | 66841.1 |
| zinc ribbon domain-containing protein | RPAL_RS26350 | Not Available | + | 5735532 - 5735759 | 8330.1 |
| duf3551 domain-containing protein | RPAL_RS26355 | Not Available | - | 5735783 - 5736061 | 9530.19 |
| hypothetical protein | RPAL_RS27915 | Not Available | - | 5736143 - 5736286 | 5182.2 |
| amp-binding protein | RPAL_RS26360 | Q5PIL0 | + | 5736341 - 5737927 | 57549.1 |
| hd domain-containing protein | RPAL_RS26365 | Q9HWS0 | - | 5738035 - 5739138 | 40382.6 |
| hypothetical protein | RPAL_RS26370 | Not Available | + | 5739356 - 5739724 | 13192.0 |
| dienelactone hydrolase family protein | RPAL_RS26375 | P73163 | + | 5739780 - 5740451 | 23854.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.