Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | RPAL_RS26285 | Not Available | - | 5720670 - 5722355 | 59691.0 |
| molecular chaperone htpg | RPAL_RS26290 | P61187 | - | 5722443 - 5724329 | 69441.6 |
| hamp domain-containing sensor histidine kinase | RPAL_RS26295 | Q9I0I2 | - | 5724417 - 5725793 | 48892.0 |
| response regulator transcription factor | RPAL_RS26300 | Q9I0I1 | - | 5725790 - 5726455 | 24422.2 |
| pepsy domain-containing protein | RPAL_RS26305 | Not Available | - | 5726455 - 5726793 | 12839.4 |
| hypothetical protein | RPAL_RS26310 | Not Available | - | 5726891 - 5727199 | 10908.7 |
| s-methyl-5-thioribose-1-phosphate isomerase | RPAL_RS26315 | Q92TI2 | - | 5727383 - 5728507 | 40062.8 |
| s-methyl-5'-thioadenosine phosphorylase | RPAL_RS26320 | Q89VT5 | - | 5728682 - 5729557 | 31571.9 |
| iron-containing alcohol dehydrogenase | RPAL_RS26325 | W7LUF3 | + | 5729837 - 5730979 | 39941.6 |
| amp-binding protein | RPAL_RS26330 | P9WQ36 | + | 5731145 - 5732695 | 57133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.