Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPAL_RS27200 | Not Available | + | 5697917 - 5698048 | 4769.15 |
| l,d-transpeptidase | RPAL_RS26190 | Q65K99 | + | 5698090 - 5698683 | 21925.6 |
| amino acid abc transporter substrate-binding protein | RPAL_RS26195 | Not Available | + | 5698729 - 5699763 | 38510.9 |
| acyl-coa dehydrogenase family protein | RPAL_RS26200 | Q2LQN9 | - | 5700162 - 5701301 | 40112.6 |
| acyl-coa dehydrogenase family protein | RPAL_RS26205 | I6Y3V5 | - | 5701469 - 5702653 | 43397.4 |
| carboxymuconolactone decarboxylase family protein | RPAL_RS26210 | Not Available | + | 5702818 - 5703363 | 20226.3 |
| mfs transporter | RPAL_RS26215 | Not Available | - | 5703418 - 5704635 | 42052.2 |
| mfs transporter | RPAL_RS26220 | A6X7E7 | - | 5704721 - 5705968 | 43346.4 |
| duf938 domain-containing protein | RPAL_RS26225 | Q66I74 | - | 5706044 - 5706760 | 25168.1 |
| tonb-dependent siderophore receptor | RPAL_RS26230 | Q6CZB5 | + | 5707276 - 5709225 | 70847.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.