Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | RPAL_RS26140 | Not Available | + | 5685033 - 5686091 | 39576.4 |
| sdr family oxidoreductase | RPAL_RS26145 | Q9RPT1 | + | 5686152 - 5686958 | 28159.9 |
| helix-turn-helix transcriptional regulator | RPAL_RS26150 | Q2RI74 | + | 5687124 - 5688098 | 35468.7 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | RPAL_RS26155 | Q5PJK8 | - | 5688105 - 5689433 | 47999.0 |
| hamp domain-containing sensor histidine kinase | RPAL_RS26160 | Q02482 | + | 5689640 - 5691721 | 75735.9 |
| duf3369 domain-containing protein | RPAL_RS26165 | Q9KMV8 | + | 5691691 - 5693430 | 63603.7 |
| response regulator | RPAL_RS26170 | P07545 | + | 5693427 - 5694167 | 26967.7 |
| sigma-70 family rna polymerase sigma factor | RPAL_RS26175 | A0PNM4 | + | 5694372 - 5694983 | 22902.5 |
| cytochrome ubiquinol oxidase subunit i | RPAL_RS26180 | Not Available | + | 5695490 - 5696896 | 51467.8 |
| cytochrome d ubiquinol oxidase subunit ii | RPAL_RS26185 | P0ABK4 | + | 5696916 - 5697920 | 37045.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.