Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase family glycosyl hydrolase | RPAL_RS26005 | Q9Z3R8 | - | 5653057 - 5654673 | 60186.3 |
| hypothetical protein | RPAL_RS27905 | Not Available | + | 5654849 - 5655001 | 5479.6 |
| hypothetical protein | RPAL_RS26010 | Not Available | + | 5655187 - 5655720 | 18443.7 |
| hypothetical protein | RPAL_RS27130 | Not Available | + | 5656000 - 5656524 | 18014.4 |
| hypothetical protein | RPAL_RS27910 | Not Available | - | 5656554 - 5656703 | 5251.44 |
| Trna-gly | Not Available | Not Available | + | 5656965 - 5657038 | Not Available |
| methylated-dna--[protein]-cysteine s-methyltransferase | RPAL_RS26020 | O26715 | + | 5657235 - 5657816 | 20548.9 |
| mate family efflux transporter | RPAL_RS26025 | Not Available | - | 5657813 - 5659249 | 49002.3 |
| tigr03768 family metallophosphoesterase | RPAL_RS26030 | Not Available | + | 5659759 - 5661738 | 72629.6 |
| 2'-deoxycytidine 5'-triphosphate deaminase | RPAL_RS26035 | Not Available | - | 5661798 - 5662904 | 40280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.