Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit beta/fixa family protein | RPAL_RS25955 | P53575 | - | 5643633 - 5644382 | 26381.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | RPAL_RS25960 | P64804 | - | 5644488 - 5645060 | 20759.8 |
| twin transmembrane helix small protein | RPAL_RS25965 | Not Available | - | 5645113 - 5645307 | 6988.16 |
| yihy/virulence factor brkb family protein | RPAL_RS25970 | O34437 | + | 5645446 - 5646339 | 32080.7 |
| atp-binding protein | RPAL_RS25975 | P0C0F7 | - | 5646266 - 5647483 | 42593.7 |
| trna glutamyl-q(34) synthetase gluqrs | RPAL_RS25980 | O68142 | - | 5647583 - 5648464 | 31996.2 |
| dna-3-methyladenine glycosylase | RPAL_RS25985 | Not Available | + | 5648585 - 5649304 | 25851.4 |
| nickel-responsive transcriptional regulator nikr | RPAL_RS25990 | B3QCC6 | - | 5649440 - 5649883 | 16694.5 |
| tonb-dependent receptor | RPAL_RS25995 | Not Available | + | 5650070 - 5652241 | 77772.2 |
| prc-barrel domain-containing protein | RPAL_RS26000 | Not Available | + | 5652657 - 5653010 | 12874.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.