Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | RPAL_RS25905 | Not Available | + | 5634971 - 5635351 | 14172.1 |
| diaminopimelate decarboxylase | RPAL_RS25910 | Q9Z661 | - | 5635587 - 5636852 | 45338.7 |
| lps translocon maturation chaperone lptm | RPAL_RS25915 | Not Available | - | 5636861 - 5637142 | 9600.5 |
| argininosuccinate lyase | RPAL_RS25920 | Q6N0L9 | - | 5637197 - 5638594 | 50717.3 |
| thiol:disulfide interchange protein tlpa | RPAL_RS25925 | P43221 | + | 5638690 - 5639376 | 24152.3 |
| hypothetical protein | RPAL_RS25930 | Not Available | - | 5639521 - 5639721 | 6580.9 |
| nad(p)h-dependent oxidoreductase | RPAL_RS25935 | A0A481WNM5 | - | 5639818 - 5640618 | 29373.3 |
| lysr family transcriptional regulator | RPAL_RS25940 | Not Available | + | 5640713 - 5641627 | 32910.0 |
| 3-hydroxybutyryl-coa dehydrogenase | RPAL_RS25945 | Q45223 | - | 5641642 - 5642523 | 31830.9 |
| electron transfer flavoprotein subunit alpha/fixb family protein | RPAL_RS25950 | P53573 | - | 5642689 - 5643633 | 32434.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.