Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | RPAL_RS25855 | P63390 | + | 5623522 - 5625141 | 59776.5 |
| duf2125 domain-containing protein | RPAL_RS25860 | Not Available | - | 5625289 - 5626482 | 42848.7 |
| gamma-glutamylcyclotransferase | RPAL_RS25865 | P39163 | + | 5626643 - 5627221 | 21633.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | RPAL_RS25870 | Q9HW50 | - | 5627238 - 5628047 | 30265.6 |
| ydcf family protein | RPAL_RS25875 | Not Available | - | 5628061 - 5628786 | 26333.5 |
| abc transporter permease | RPAL_RS25880 | Not Available | - | 5628942 - 5629928 | 34925.4 |
| cell division atp-binding protein ftse | RPAL_RS25885 | P0A9R9 | - | 5629921 - 5630580 | 24474.0 |
| mj0042-type zinc finger domain-containing protein | RPAL_RS25890 | Not Available | + | 5630724 - 5631620 | 32886.6 |
| response regulator | RPAL_RS25895 | P48259 | + | 5631680 - 5632060 | 13549.4 |
| tigr02302 family protein | RPAL_RS25900 | Not Available | - | 5632259 - 5634811 | 92164.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.