Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:acceptor oxidoreductase family protein | RPAL_RS25805 | Q3M8N0 | + | 5603554 - 5608542 | 179174.0 |
| sulfide/dihydroorotate dehydrogenase-like fad/nad-binding protein | RPAL_RS25810 | Q8U195 | + | 5608539 - 5611373 | 103839.0 |
| dna polymerase i | RPAL_RS25815 | Q9S1G2 | + | 5611612 - 5614689 | 111086.0 |
| orotate phosphoribosyltransferase | RPAL_RS25820 | B3QC92 | + | 5615008 - 5615571 | 20065.2 |
| duf2865 domain-containing protein | RPAL_RS25825 | Not Available | + | 5615731 - 5616477 | 26123.8 |
| hypothetical protein | RPAL_RS25830 | Not Available | - | 5616751 - 5617182 | 16157.9 |
| glycogen/starch/alpha-glucan phosphorylase | RPAL_RS25835 | P73511 | + | 5617466 - 5620012 | 94519.8 |
| acyl-coa thioesterase ii | RPAL_RS25840 | Not Available | + | 5620293 - 5621126 | 30126.3 |
| arginase | RPAL_RS25845 | P14012 | + | 5621182 - 5622165 | 34868.9 |
| is110 family transposase | RPAL_RS25850 | Not Available | + | 5622436 - 5623395 | 34360.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.