Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | RPAL_RS25655 | Not Available | + | 5575300 - 5577270 | 70266.5 |
| hypothetical protein | RPAL_RS25660 | Not Available | + | 5577419 - 5577796 | 13565.4 |
| nadh:flavin oxidoreductase/nadh oxidase | RPAL_RS25665 | Not Available | - | 5577987 - 5579150 | 42521.6 |
| tripartite tricarboxylate transporter substrate binding protein | RPAL_RS25670 | P27103 | + | 5579341 - 5580315 | 33962.2 |
| lysr substrate-binding domain-containing protein | RPAL_RS25675 | P27111 | + | 5580337 - 5581239 | 32576.1 |
| 4-oxalomesaconate tautomerase | RPAL_RS25680 | Q0KJL4 | + | 5581366 - 5582484 | 39018.0 |
| amidohydrolase family protein | RPAL_RS25685 | G2IQQ5 | + | 5582692 - 5583720 | 38469.1 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | RPAL_RS25690 | Q9AQI0 | + | 5583723 - 5584418 | 24440.8 |
| duf1932 domain-containing protein | RPAL_RS25695 | Not Available | + | 5584418 - 5585347 | 33058.2 |
| amidohydrolase family protein | RPAL_RS25700 | Q93PS7 | + | 5585596 - 5586510 | 34416.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.