Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | RPAL_RS25600 | P25197 | + | 5560047 - 5563199 | 112416.0 |
| asma family protein | RPAL_RS25605 | Not Available | + | 5563241 - 5565049 | 62590.0 |
| efflux rnd transporter periplasmic adaptor subunit | RPAL_RS25610 | Not Available | + | 5565131 - 5566027 | 30876.5 |
| superinfection immunity protein | RPAL_RS25615 | Not Available | - | 5566089 - 5566343 | 9465.73 |
| methyl-accepting chemotaxis protein | RPAL_RS25620 | Q2W4T8 | + | 5566901 - 5568580 | 59077.2 |
| lysine--trna ligase | RPAL_RS25625 | Q98BC8 | - | 5568622 - 5570259 | 60910.6 |
| transporter substrate-binding domain-containing protein | RPAL_RS25630 | G3XD47 | - | 5570293 - 5571213 | 33709.3 |
| glycosyltransferase family 2 protein | RPAL_RS25635 | Not Available | + | 5571290 - 5573341 | 75463.0 |
| sco family protein | RPAL_RS25640 | Q1RIN4 | - | 5573343 - 5573942 | 21792.5 |
| hypothetical protein | RPAL_RS25645 | Not Available | - | 5574118 - 5574576 | 16625.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.