Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetase | RPAL_RS25550 | P16930 | - | 5549115 - 5550383 | 46414.4 |
| maleylacetoacetate isomerase | RPAL_RS25555 | Q9KSB2 | - | 5550676 - 5551332 | 24688.5 |
| homogentisate 1,2-dioxygenase | RPAL_RS25560 | B3QB98 | - | 5551329 - 5552675 | 49835.2 |
| mbl fold metallo-hydrolase | RPAL_RS25565 | Not Available | - | 5552732 - 5553685 | 34887.1 |
| duf2783 domain-containing protein | RPAL_RS25570 | Not Available | - | 5553912 - 5554130 | 7620.96 |
| fad-dependent oxidoreductase | RPAL_RS25575 | A4T8B6 | - | 5554420 - 5556027 | 59557.4 |
| marr family winged helix-turn-helix transcriptional regulator | RPAL_RS25580 | Not Available | + | 5556154 - 5556651 | 18880.7 |
| caspase family protein | RPAL_RS25585 | Not Available | + | 5556822 - 5558246 | 50893.1 |
| ompa family protein | RPAL_RS25590 | P13794 | + | 5558351 - 5559001 | 22786.8 |
| efflux rnd transporter periplasmic adaptor subunit | RPAL_RS25595 | Not Available | + | 5559160 - 5560047 | 30783.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.