Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | RPAL_RS25500 | P55612 | - | 5534515 - 5535999 | 54159.3 |
| trehalose-phosphatase | RPAL_RS25505 | P0CL50 | - | 5536156 - 5536953 | 28698.6 |
| mfs transporter | RPAL_RS25510 | Q46909 | - | 5536950 - 5538437 | 53193.1 |
| methyl-accepting chemotaxis protein | RPAL_RS25515 | Not Available | - | 5538619 - 5540661 | 71168.2 |
| helix-turn-helix transcriptional regulator | RPAL_RS25520 | Not Available | - | 5540780 - 5541526 | 27274.3 |
| 2-isopropylmalate synthase | RPAL_RS25525 | B1JDI2 | + | 5541865 - 5543526 | 61054.2 |
| (2fe-2s)-binding protein | RPAL_RS25530 | Q4J6M5 | + | 5543831 - 5544316 | 17266.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RPAL_RS25535 | Not Available | + | 5544427 - 5546781 | 83945.1 |
| xanthine dehydrogenase family protein subunit m | RPAL_RS25540 | P19914 | + | 5546890 - 5547690 | 28005.7 |
| caib/baif coa-transferase family protein | RPAL_RS25545 | O06543 | + | 5547875 - 5548990 | 39121.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.