Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | RPAL_RS25450 | Not Available | + | 5524463 - 5525422 | 33000.8 |
| sdr family nad(p)-dependent oxidoreductase | RPAL_RS25455 | P51831 | + | 5525469 - 5526215 | 26711.0 |
| mdr family oxidoreductase | RPAL_RS25460 | Q3J6K9 | + | 5526248 - 5527234 | 34375.7 |
| gnat family n-acetyltransferase | RPAL_RS25465 | Q9I1K2 | + | 5527311 - 5527814 | 18141.7 |
| 5s ribosomal rna | Not Available | Not Available | + | 5528052 - 5528166 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 5528237 - 5531053 | Not Available |
| Trna-ala | Not Available | Not Available | + | 5531465 - 5531540 | Not Available |
| Trna-ile | Not Available | Not Available | + | 5531574 - 5531650 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 5531868 - 5533356 | Not Available |
| Trna-ser | Not Available | Not Available | + | 5534217 - 5534306 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.