Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | RPAL_RS25405 | P16528 | - | 5514019 - 5514774 | 27912.0 |
| extracellular solute-binding protein | RPAL_RS25410 | Q9I6R6 | - | 5514855 - 5515943 | 39943.0 |
| abc transporter permease subunit | RPAL_RS25415 | P45170 | - | 5515977 - 5517767 | 63372.9 |
| abc transporter atp-binding protein | RPAL_RS25420 | Q160M2 | - | 5517764 - 5518909 | 41466.0 |
| coa transferase subunit a | RPAL_RS25425 | Not Available | + | 5519162 - 5519971 | 28743.0 |
| coa transferase | RPAL_RS25430 | Not Available | + | 5519971 - 5520738 | 27871.4 |
| molybdopterin-dependent oxidoreductase | RPAL_RS28165 | P54934 | + | 5520828 - 5521781 | 34958.4 |
| molybdopterin dinucleotide binding domain-containing protein | RPAL_RS28275 | Not Available | + | 5521987 - 5523078 | 39861.9 |
| peroxidase-related enzyme | RPAL_RS25440 | Not Available | + | 5523095 - 5523664 | 21248.6 |
| l-fuculose-phosphate aldolase | RPAL_RS25445 | P0AB87 | + | 5523746 - 5524432 | 24814.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.