Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RPAL_RS25310 | Not Available | - | 5490967 - 5491506 | 19842.7 |
| iron-sulfur cluster assembly accessory protein | RPAL_RS25315 | Not Available | - | 5491510 - 5491866 | 12518.0 |
| 4fe-4s binding protein | RPAL_RS25320 | P27394 | - | 5491877 - 5492098 | 7734.19 |
| nitrogenase cofactor biosynthesis protein nifb | RPAL_RS25325 | P27714 | - | 5492122 - 5493678 | 56329.5 |
| 4fe-4s binding protein | RPAL_RS25330 | P00207 | - | 5493837 - 5494031 | 6860.25 |
| nif-specific transcriptional activator nifa | RPAL_RS25335 | P05407 | - | 5494304 - 5496058 | 64776.4 |
| sdr family nad(p)-dependent oxidoreductase | RPAL_RS25340 | Not Available | - | 5496371 - 5497168 | 28260.9 |
| xanthine dehydrogenase | RPAL_RS25345 | Not Available | + | 5497524 - 5498378 | 30395.6 |
| ferrous iron transporter b | RPAL_RS25350 | Q72SI0 | - | 5498526 - 5500406 | 67966.2 |
| feoa family protein | RPAL_RS25355 | Not Available | - | 5500444 - 5500734 | 10630.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.