Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrogenase iron-molybdenum cofactor biosynthesis protein nife | RPAL_RS25260 | P26506 | - | 5482067 - 5483530 | 53558.5 |
| nitrogenase molybdenum-iron protein subunit beta | RPAL_RS25265 | Not Available | - | 5483570 - 5485129 | 57663.3 |
| nitrogenase molybdenum-iron protein alpha chain | RPAL_RS25270 | P06120 | - | 5485218 - 5486681 | 54595.2 |
| nitrogenase iron protein | RPAL_RS25275 | Q2J1I1 | - | 5486753 - 5487649 | 31994.5 |
| sir2 family protein | RPAL_RS25280 | Not Available | - | 5488226 - 5489128 | 33508.0 |
| hypothetical protein | RPAL_RS25285 | Not Available | - | 5489144 - 5489422 | 9964.71 |
| putative nitrogen fixation protein nift | RPAL_RS25290 | Q53202 | - | 5489425 - 5489625 | 7247.98 |
| nitrogen fixation protein nifz | RPAL_RS25295 | Not Available | - | 5489663 - 5489896 | 8728.22 |
| nitrogen fixation protein nifz | RPAL_RS25300 | Q53203 | - | 5489896 - 5490195 | 11073.2 |
| 4fe4s-binding leucine-rich repeat protein | RPAL_RS25305 | P17435 | - | 5490192 - 5490977 | 29709.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.