Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homocitrate synthase | RPAL_RS25210 | Q01181 | - | 5474407 - 5475600 | 41690.9 |
| cysteine desulfurase nifs | RPAL_RS25215 | P57794 | - | 5475593 - 5476825 | 43531.3 |
| fe-s cluster assembly protein nifu | RPAL_RS25220 | Q43909 | - | 5476822 - 5477808 | 34336.3 |
| iron-sulfur cluster assembly accessory protein | RPAL_RS25225 | Q53211 | - | 5477836 - 5478156 | 10878.0 |
| nitrogen fixation protein nifq | RPAL_RS25230 | Q53213 | - | 5478438 - 5479148 | 25844.9 |
| ferredoxin iii, nif-specific | RPAL_RS25235 | P55678 | - | 5479166 - 5479477 | 11212.5 |
| cce_0567 family metalloprotein | RPAL_RS25240 | P26486 | - | 5479538 - 5479744 | 7576.16 |
| nifx-associated nitrogen fixation protein | RPAL_RS25245 | P25015 | - | 5479763 - 5480227 | 17471.4 |
| nitrogen fixation protein nifx | RPAL_RS25250 | O87628 | - | 5480229 - 5480627 | 14622.6 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nifn | RPAL_RS25255 | P26507 | - | 5480683 - 5482056 | 48340.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.